West Indian T2T · mRNA

Pa04g2223.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

468
bp
Pa04:47,778,690–47,779,157
genomic location
Record overview

Feature identity

Identifier
Pa04g2223.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
468 bp
Genomic location
Pa04:47,778,690–47,779,157
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC104591050 | Seed ortholog: 337451.A0A3S3NM88 | COG: S | eggNOG OG: p450@131567|c-5, p450@2759|eQ-13
Gene Ontology
GO:0002213 defense response to insect; GO:0004497 monooxygenase activity; GO:0005575 cellular_component; GO:0005829 cytosol; GO:0006952 defense response; GO:0009507 chloroplast; GO:0009617 response to bacterium; GO:0010039 response to iron ion; GO:0010446 response to alkaline pH; GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor; GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; GO:0033075 isoquinoline alkaloid biosynthetic process; GO:0046246 terpene biosynthetic process; GO:0047084 methyltetrahydroprotoberberine 14-monooxygenase activity; GO:0047128 1,2-dehydroreticulinium reductase (NADPH) activity; GO:0050832 defense response to fungus; GO:0071281 cellular response to iron ion; GO:0071456 cellular response to hypoxia; GO:0097007 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity; GO:0097008 (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity; GO:0097295 morphine biosynthetic process; GO:0102171 DMNT synthase activity; GO:0106144 fraxetin 5-hydroxylase activity; GO:0106146 sideretin biosynthesis; GO:0106149 indole-3-carbonyl nitrile 4-hydroxylase activity; GO:1901045 negative regulation of egg-laying behavior
KEGG
EC: ec:1.14.14.163, ec:1.14.14.164, ec:1.14.14.165, ec:1.14.14.166, ec:1.14.14.167, ec:1.14.14.58, ec:1.14.14.59, ec:1.14.14.97, ec:1.14.14.98, ec:1.14.19.54, ec:1.5.1.27 | KO: K17961, K20621, K21692, K21693, K22093, K22094, K22096, K23136, K23137, K25580, K25581 | Pathway: 00904, 00950, 00960, 00999, 01100, 01110 | Module: M00944, M00945, M00946 | BRITE: 00001, 00199, 01000
Biological context

Connected feature records

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