Feature identity
- Identifier
- Pa04g2085.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 672 bp
- Genomic location
- Pa04:45,863,741–45,868,835
- Strand
- +
West Indian T2T · mRNA
Pa04g2085.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 672
- bp
- Pa04:45,863,741–45,868,835
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa04g2085
- eggNOG
- Preferred name: LOC104596815 | Seed ortholog: 56857.A0A200PTF0 | COG: S | eggNOG OG: FKBP_C@131567|JD-12, FKBP_C@33090|BSC-25
- Gene Ontology
- GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008150 biological_process; GO:0009507 chloroplast; GO:0009543 chloroplast thylakoid lumen; GO:0010207 photosystem II assembly; GO:0016491 oxidoreductase activity; GO:0031977 thylakoid lumen
- KEGG
- EC: ec:5.2.1.8 | KO: K01802 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa04g2085.1-protein
derives_frommRNAPa04g2085.1
mRNAPa04g2085.1
part_ofgenePa04g2085
exon
part_ofPa04g2085.1:1mRNAPa04g2085.1
exon
part_ofPa04g2085.1:2mRNAPa04g2085.1
exon
part_ofPa04g2085.1:3mRNAPa04g2085.1
exon
part_ofPa04g2085.1:4mRNAPa04g2085.1
exon
part_ofPa04g2085.1:5mRNAPa04g2085.1
exon
part_ofPa04g2085.1:6mRNAPa04g2085.1
CDS
part_ofPa04g2085.1:cdsmRNAPa04g2085.1
