Feature identity
- Identifier
- PaHa01g22860.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,728 bp
- Genomic location
- 1:57,068,582–57,075,363
- Strand
- −
Hass · mRNA
PaHa01g22860.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,728
- bp
- 1:57,068,582–57,075,363
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g22860
- eggNOG
- Preferred name: SCR_2 | Seed ortholog: 337451.A0A3S3NGC7 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|NC-17, GRAS@3398|WW-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008356 asymmetric cell division; GO:0009630 gravitropism; GO:0009956 radial pattern formation; GO:0043565 sequence-specific DNA binding; GO:0045454 cell redox homeostasis; GO:0048364 root development; GO:0048366 leaf development; GO:0051457 maintenance of protein location in nucleus; GO:0090610 bundle sheath cell fate specification
- KEGG
- KO: K27742 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g22860.1-protein
derives_frommRNAPaHa01g22860.1
mRNAPaHa01g22860.1
part_ofgenePaHa01g22860
CDS
part_ofPaHa01g22860.1-CDS-1-1787993825:57068582..57069023mRNAPaHa01g22860.1
CDS
part_ofPaHa01g22860.1-CDS-1-1787993825:57074078..57075363mRNAPaHa01g22860.1
exon
part_ofPaHa01g22860.1-exon-1-1787993825:57068582..57069023mRNAPaHa01g22860.1
exon
part_ofPaHa01g22860.1-exon-1-1787993825:57074078..57075363mRNAPaHa01g22860.1
