Feature identity
- Identifier
- Pa02g4966.3
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 207 bp
- Genomic location
- Pa02:102,412,859–102,413,651
- Strand
- +
West Indian T2T · mRNA
Pa02g4966.3
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 207
- bp
- Pa02:102,412,859–102,413,651
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa02g4966
- eggNOG
- Preferred name: ATR3, LOC104589512 | Seed ortholog: 218851.A0A2G5F6F4, 337451.A0A443N930 | COG: S | eggNOG OG: FAD_binding_1@131567|N-4, Flavodoxin_1@131567|Aw-10, Flavodoxin_1@2759|Gl-14, NAD_binding_1@131567|Ip-13, NAD_binding_1@2759|PH-15, UNK.MLVW@1437183|A-1
- Gene Ontology
- GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009793 embryo development ending in seed dormancy; GO:0016651 oxidoreductase activity, acting on NAD(P)H
- KEGG
- EC: ec:1.6.2.4 | KO: K00327, K09422 | BRITE: 00001, 01000, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa02g4966.3-protein
derives_frommRNAPa02g4966.3
exon
part_ofPa02g4966.2:5mRNAPa02g4966.3
exon
part_ofPa02g4966.2:6mRNAPa02g4966.3
mRNAPa02g4966.3
part_ofgenePa02g4966
exon
part_ofPa02g4966.3:7mRNAPa02g4966.3
CDS
part_ofPa02g4966.3:cdsmRNAPa02g4966.3
