Feature identity
- Identifier
- Pa02g5205.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,623 bp
- Genomic location
- Pa02:105,501,659–105,505,362
- Strand
- +
West Indian T2T · mRNA
Pa02g5205.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,623
- bp
- Pa02:105,501,659–105,505,362
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa02g5205
- eggNOG
- Preferred name: FDH | Seed ortholog: 337451.A0A443N9L2 | COG: S | eggNOG OG: ACP_syn_III_C@2759|B-2!, ACP_syn_III_C@3193|EE-13, ACP_syn_III_C@3398|St-18, ACP_syn_III_C@35493|DF-12, FAE1_CUT1_RppA@131567|A-1, FAE1_CUT1_RppA@2759|BO-11, FAE1_CUT1_RppA@3193|Eb-15, FAE1_CUT1_RppA@33090|Df-14
- Gene Ontology
- GO:0000038 very long-chain fatty acid metabolic process; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0008610 lipid biosynthetic process; GO:0009409 response to cold; GO:0009416 response to light stimulus; GO:0090377 seed trichome initiation; GO:0090627 plant epidermal cell differentiation; GO:0160062 cutin-based cuticle development
- KEGG
- EC: ec:2.3.1.199 | KO: K15397 | Pathway: 00062, 01100, 01110, 04626 | Module: M00415 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa02g5205.1-protein
derives_frommRNAPa02g5205.1
mRNAPa02g5205.1
part_ofgenePa02g5205
exon
part_ofPa02g5205.1:1mRNAPa02g5205.1
exon
part_ofPa02g5205.1:2mRNAPa02g5205.1
exon
part_ofPa02g5205.1:3mRNAPa02g5205.1
CDS
part_ofPa02g5205.1:cdsmRNAPa02g5205.1
