Feature identity
- Identifier
- PaHa01g23500.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 708 bp
- Genomic location
- 1:61,687,210–61,699,218
- Strand
- +
Hass · mRNA
PaHa01g23500.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 708
- bp
- 1:61,687,210–61,699,218
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g23500
- eggNOG
- Preferred name: HOX32 | Seed ortholog: 337451.A0A3S3MLF5 | COG: S | eggNOG OG: Homeodomain@131567|HP-13, Homeodomain@35493|CNy-26, START@131567|e-5, START@2759|CL-9, START@3398|Mr-14, START@35493|JK-13
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009855 determination of bilateral symmetry; GO:0009880 embryonic pattern specification; GO:0009943 adaxial/abaxial axis specification; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0009955 adaxial/abaxial pattern specification; GO:0010014 meristem initiation; GO:0010072 primary shoot apical meristem specification; GO:0080060 integument development
- KEGG
- KO: K09338 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g23500.1-protein
derives_frommRNAPaHa01g23500.1
mRNAPaHa01g23500.1
part_ofgenePaHa01g23500
CDS
part_ofPaHa01g23500.1-CDS-1-1787993825:61687210..61687418mRNAPaHa01g23500.1
CDS
part_ofPaHa01g23500.1-CDS-1-1787993825:61688899..61688914mRNAPaHa01g23500.1
CDS
part_ofPaHa01g23500.1-CDS-1-1787993825:61689003..61689247mRNAPaHa01g23500.1
CDS
part_ofPaHa01g23500.1-CDS-1-1787993825:61689335..61689394mRNAPaHa01g23500.1
CDS
part_ofPaHa01g23500.1-CDS-1-1787993825:61697259..61697277mRNAPaHa01g23500.1
CDS
part_ofPaHa01g23500.1-CDS-1-1787993825:61697361..61697394mRNAPaHa01g23500.1
CDS
part_ofPaHa01g23500.1-CDS-1-1787993825:61698468..61698520mRNAPaHa01g23500.1
CDS
part_ofPaHa01g23500.1-CDS-1-1787993825:61699147..61699218mRNAPaHa01g23500.1
exon
part_ofPaHa01g23500.1-exon-1-1787993825:61687210..61687418mRNAPaHa01g23500.1
exon
part_ofPaHa01g23500.1-exon-1-1787993825:61688899..61688914mRNAPaHa01g23500.1
exon
part_ofPaHa01g23500.1-exon-1-1787993825:61689003..61689247mRNAPaHa01g23500.1
exon
part_ofPaHa01g23500.1-exon-1-1787993825:61689335..61689394mRNAPaHa01g23500.1
exon
part_ofPaHa01g23500.1-exon-1-1787993825:61697259..61697277mRNAPaHa01g23500.1
exon
part_ofPaHa01g23500.1-exon-1-1787993825:61697361..61697394mRNAPaHa01g23500.1
exon
part_ofPaHa01g23500.1-exon-1-1787993825:61698468..61698520mRNAPaHa01g23500.1
exon
part_ofPaHa01g23500.1-exon-1-1787993825:61699147..61699218mRNAPaHa01g23500.1
