Feature identity
- Identifier
- Pa02g3233.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 831 bp
- Genomic location
- Pa02:80,246,195–80,247,303
- Strand
- +
West Indian T2T · mRNA
Pa02g3233.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 831
- bp
- Pa02:80,246,195–80,247,303
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa02g3233
- eggNOG
- Preferred name: HOX19 | Seed ortholog: 337451.A0A3S3PW52 | COG: S | eggNOG OG: HALZ@131221|ID-15, HALZ@131567|y-8, HALZ@3398|Pv-17, HALZ@35493|At-10, Homeodomain@131221|HaM-32, Homeodomain@131567|XU-17, Homeodomain@2759|ACU-20!, Homeodomain@3193|KGJ-34, Homeodomain@3398|XPN-42, Homeodomain@35493|BwP-25
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0001217 DNA-binding transcription repressor activity; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009735 response to cytokinin; GO:0009737 response to abscisic acid; GO:0009738 abscisic acid-activated signaling pathway
- KEGG
- KO: K09338 | Pathway: 04113, 04148, 04927, 04934, 05202 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa02g3233.1-protein
derives_frommRNAPa02g3233.1
mRNAPa02g3233.1
part_ofgenePa02g3233
exon
part_ofPa02g3233.1:1mRNAPa02g3233.1
exon
part_ofPa02g3233.1:2mRNAPa02g3233.1
exon
part_ofPa02g3233.1:3mRNAPa02g3233.1
CDS
part_ofPa02g3233.1:cdsmRNAPa02g3233.1
