West Indian T2T · mRNA

Pa02g3199.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,965
bp
Pa02:79,555,575–79,559,765
genomic location
Record overview

Feature identity

Identifier
Pa02g3199.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,965 bp
Genomic location
Pa02:79,555,575–79,559,765
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: ANT | Seed ortholog: 337451.A0A3S3MHP9 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Aps-24, AP2@33090|Xs-18, AP2@3398|GkU-33
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007276 gamete generation; GO:0010492 maintenance of shoot apical meristem identity; GO:0010601 positive regulation of auxin biosynthetic process; GO:0019760 glucosinolate metabolic process; GO:0042127 regulation of cell population proliferation; GO:0048830 adventitious root development; GO:0051301 cell division; GO:0080037 negative regulation of cytokinin-activated signaling pathway; GO:1905392 plant organ morphogenesis
KEGG
KO: K09285 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.