West Indian T2T · mRNA

Pa02g3309.3

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,698
bp
Pa02:81,510,383–81,556,170
genomic location
Record overview

Feature identity

Identifier
Pa02g3309.3
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,698 bp
Genomic location
Pa02:81,510,383–81,556,170
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC100827950 | Seed ortholog: 337451.A0A3S3MCT0 | COG: COG2814 | eggNOG OG: MFS_1@131567|AFC-18, MFS_1@3398|WFo-36, OATP@131567|C-2!
Gene Ontology
GO:0001782 B cell homeostasis; GO:0002260 lymphocyte homeostasis; GO:0002920 regulation of humoral immune response; GO:0003376 sphingosine-1-phosphate receptor signaling pathway; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006665 sphingolipid metabolic process; GO:0006869 lipid transport; GO:0006914 autophagy; GO:0007605 sensory perception of sound; GO:0009507 chloroplast; GO:0030148 sphingolipid biosynthetic process; GO:0033700 phospholipid efflux; GO:0043029 T cell homeostasis; GO:0046624 sphingolipid intramembrane carrier activity; GO:0048073 regulation of eye pigmentation; GO:0048535 lymph node development; GO:0051977 lysophospholipid transport; GO:0051978 lysophospholipid:sodium symporter activity; GO:0060348 bone development; GO:0072676 lymphocyte migration; GO:0090398 cellular senescence; GO:0097352 autophagosome maturation; GO:1905671 regulation of lysosome organization; GO:2000404 regulation of T cell migration
KEGG
EC: ec:2.7.1.32, ec:2.7.1.82 | KO: K23677 | Pathway: 00564, 01100 | Module: M00090, M00092 | BRITE: 00001, 02000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.