West Indian T2T · mRNA

Pa02g2729.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,857
bp
Pa02:71,441,491–71,445,517
genomic location
Record overview

Feature identity

Identifier
Pa02g2729.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,857 bp
Genomic location
Pa02:71,441,491–71,445,517
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: ATH1 | Seed ortholog: 337451.A0A443N4Z7 | COG: S | eggNOG OG: Homeobox_KN@131567|A-1*, Homeobox_KN@2759|C-2!, Homeobox_KN@58023|Di-11, POX@131567|A-1*, POX@3193|W-7, POX@3398|AG-10
Gene Ontology
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0009640 photomorphogenesis; GO:0010073 meristem maintenance; GO:0010227 floral organ abscission; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0010371 regulation of gibberellin biosynthetic process; GO:0043565 sequence-specific DNA binding; GO:0090470 shoot organ boundary specification
KEGG
EC: ec:2.1.1.354 | KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 | Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 | BRITE: 00001, 01000, 03000, 03036
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.