Feature identity
- Identifier
- Pa02g1816.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 240 bp
- Genomic location
- Pa02:34,979,743–34,982,210
- Strand
- −
West Indian T2T · mRNA
Pa02g1816.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 240
- bp
- Pa02:34,979,743–34,982,210
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa02g1816
- eggNOG
- Preferred name: ARF17 | Seed ortholog: 337451.A0A3S3NSU0 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|xW-20, AUX_IAA@3398|Aeu-24, Auxin_resp@131221|y-7, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3193|Aa-8, Auxin_resp@3398|Dy-12, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AqU-23, B3@33090|Id-12, B3@3398|BZk-26!
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0009908 flower development
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa02g1816.1-protein
derives_frommRNAPa02g1816.1
mRNAPa02g1816.1
part_ofgenePa02g1816
exon
part_ofPa02g1816.1:1mRNAPa02g1816.1
exon
part_ofPa02g1816.1:2mRNAPa02g1816.1
exon
part_ofPa02g1816.1:3mRNAPa02g1816.1
exon
part_ofPa02g1816.1:4mRNAPa02g1816.1
CDS
part_ofPa02g1816.1:cdsmRNAPa02g1816.1
