Feature identity
- Identifier
- PaHa07g28790.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,881 bp
- Genomic location
- 7:77,117,566–77,126,996
- Strand
- +
Hass · mRNA
PaHa07g28790.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,881
- bp
- 7:77,117,566–77,126,996
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa07g28790
- eggNOG
- Preferred name: TCP2 | Seed ortholog: 337451.A0A443P519 | COG: S | eggNOG OG: TCP@131567|A-1*, TCP@2759|F-3, TCP@3398|AO-8, TCP@58023|f-6
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009637 response to blue light; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0048366 leaf development; GO:2000306 positive regulation of photomorphogenesis
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa07g28790.1-protein
derives_frommRNAPaHa07g28790.1
mRNAPaHa07g28790.1
part_ofgenePaHa07g28790
CDS
part_ofPaHa07g28790.1-CDS-7-1787993825:77117566..77117794mRNAPaHa07g28790.1
CDS
part_ofPaHa07g28790.1-CDS-7-1787993825:77117895..77117959mRNAPaHa07g28790.1
CDS
part_ofPaHa07g28790.1-CDS-7-1787993825:77118115..77118155mRNAPaHa07g28790.1
CDS
part_ofPaHa07g28790.1-CDS-7-1787993825:77118221..77118291mRNAPaHa07g28790.1
CDS
part_ofPaHa07g28790.1-CDS-7-1787993825:77118395..77119662mRNAPaHa07g28790.1
CDS
part_ofPaHa07g28790.1-CDS-7-1787993825:77119728..77119789mRNAPaHa07g28790.1
CDS
part_ofPaHa07g28790.1-CDS-7-1787993825:77125950..77126010mRNAPaHa07g28790.1
CDS
part_ofPaHa07g28790.1-CDS-7-1787993825:77126913..77126996mRNAPaHa07g28790.1
exon
part_ofPaHa07g28790.1-exon-7-1787993825:77117566..77117794mRNAPaHa07g28790.1
exon
part_ofPaHa07g28790.1-exon-7-1787993825:77117895..77117959mRNAPaHa07g28790.1
exon
part_ofPaHa07g28790.1-exon-7-1787993825:77118115..77118155mRNAPaHa07g28790.1
exon
part_ofPaHa07g28790.1-exon-7-1787993825:77118221..77118291mRNAPaHa07g28790.1
exon
part_ofPaHa07g28790.1-exon-7-1787993825:77118395..77119662mRNAPaHa07g28790.1
exon
part_ofPaHa07g28790.1-exon-7-1787993825:77119728..77119789mRNAPaHa07g28790.1
exon
part_ofPaHa07g28790.1-exon-7-1787993825:77125950..77126010mRNAPaHa07g28790.1
exon
part_ofPaHa07g28790.1-exon-7-1787993825:77126913..77126996mRNAPaHa07g28790.1
