Feature identity
- Identifier
- PaHa01g23790.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,278 bp
- Genomic location
- 1:63,527,643–63,530,564
- Strand
- −
Hass · mRNA
PaHa01g23790.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,278
- bp
- 1:63,527,643–63,530,564
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g23790
- eggNOG
- Preferred name: LOC107922949 | Seed ortholog: 3641.A0A061DRG4 | COG: S | eggNOG OG: HSF_DNA-bind@131567|Dp-10, HSF_DNA-bind@1437183|BrS-29, HSF_DNA-bind@3193|AWe-23, HSF_DNA-bind@33090|fZ-18, HSF_DNA-bind@3398|AtY-25, HSF_DNA-bind@35493|uY-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0009408 response to heat
- KEGG
- EC: ec:1.13.11.53, ec:1.13.11.54 | KO: K09419 | Pathway: 00270, 01100 | Module: M00034 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g23790.1-protein
derives_frommRNAPaHa01g23790.1
mRNAPaHa01g23790.1
part_ofgenePaHa01g23790
CDS
part_ofPaHa01g23790.1-CDS-1-1787993825:63527643..63527740mRNAPaHa01g23790.1
CDS
part_ofPaHa01g23790.1-CDS-1-1787993825:63527822..63527877mRNAPaHa01g23790.1
CDS
part_ofPaHa01g23790.1-CDS-1-1787993825:63527953..63528018mRNAPaHa01g23790.1
CDS
part_ofPaHa01g23790.1-CDS-1-1787993825:63528284..63528309mRNAPaHa01g23790.1
CDS
part_ofPaHa01g23790.1-CDS-1-1787993825:63528399..63529130mRNAPaHa01g23790.1
CDS
part_ofPaHa01g23790.1-CDS-1-1787993825:63530265..63530564mRNAPaHa01g23790.1
exon
part_ofPaHa01g23790.1-exon-1-1787993825:63527643..63527740mRNAPaHa01g23790.1
exon
part_ofPaHa01g23790.1-exon-1-1787993825:63527822..63527877mRNAPaHa01g23790.1
exon
part_ofPaHa01g23790.1-exon-1-1787993825:63527953..63528018mRNAPaHa01g23790.1
exon
part_ofPaHa01g23790.1-exon-1-1787993825:63528284..63528309mRNAPaHa01g23790.1
exon
part_ofPaHa01g23790.1-exon-1-1787993825:63528399..63529130mRNAPaHa01g23790.1
exon
part_ofPaHa01g23790.1-exon-1-1787993825:63530265..63530564mRNAPaHa01g23790.1
