Feature identity
- Identifier
- Pa01g4100.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 729 bp
- Genomic location
- Pa01:91,307,452–91,317,696
- Strand
- −
West Indian T2T · mRNA
Pa01g4100.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 729
- bp
- Pa01:91,307,452–91,317,696
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g4100
- eggNOG
- Preferred name: LOC103714369 | Seed ortholog: 337451.A0A3S3M8D5 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@1437183|Aje-24!, AP2@3193|WZ-18, AP2@33090|Ng-16, AP2@3398|AGP-22
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009737 response to abscisic acid; GO:0010286 heat acclimation
- KEGG
- KO: K09286 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g4100.1-protein
derives_frommRNAPa01g4100.1
mRNAPa01g4100.1
part_ofgenePa01g4100
exon
part_ofPa01g4100.1:1mRNAPa01g4100.1
exon
part_ofPa01g4100.1:2mRNAPa01g4100.1
CDS
part_ofPa01g4100.1:cdsmRNAPa01g4100.1
