West Indian T2T · mRNA

Pa01g2983.3

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,677
bp
Pa01:75,193,600–75,195,488
genomic location
Record overview

Feature identity

Identifier
Pa01g2983.3
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,677 bp
Genomic location
Pa01:75,193,600–75,195,488
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC103703655, LOC120111410 | Seed ortholog: 337451.A0A3S3MI96, 337451.A0A3S3QX23 | COG: S | eggNOG OG: Aminotran_1_2@131567|KR-17, Aminotran_1_2@2759|Bhb-30, p450@131567|c-5, p450@1437183|lSe-34, p450@2759|eQ-13, p450@3193|Raz-28
Gene Ontology
GO:0004069 L-aspartate:2-oxoglutarate transaminase activity; GO:0004497 monooxygenase activity; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005886 plasma membrane; GO:0006103 2-oxoglutarate metabolic process; GO:0006531 aspartate metabolic process; GO:0006536 glutamate metabolic process; GO:0008150 biological_process; GO:0009409 response to cold; GO:0009507 chloroplast; GO:0009536 plastid; GO:0009570 chloroplast stroma; GO:0009625 response to insect; GO:0009941 chloroplast envelope; GO:0010319 stromule; GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; GO:0019756 cyanogenic glycoside biosynthetic process; GO:0019761 glucosinolate biosynthetic process; GO:0019825 oxygen binding; GO:0048046 apoplast; GO:0050370 tyrosine N-monooxygenase activity; GO:0102001 isoleucine N-monooxygenase (oxime forming) activity; GO:0102002 valine N-monooxygenase (oxime forming) activity
KEGG
EC: ec:1.14.14.40, ec:2.6.1.1 | KO: K00811, K12153 | Pathway: 00220, 00250, 00270, 00330, 00350, 00360, 00400, 00460, 00950, 00960, 00966, 01100, 01110, 01210, 01230 | Module: M00170, M00171, M00369 | BRITE: 00001, 00199, 01000, 01007
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.