West Indian T2T · mRNA

Pa01g2956.2

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

357
bp
Pa01:74,811,462–74,812,811
genomic location
Record overview

Feature identity

Identifier
Pa01g2956.2
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
357 bp
Genomic location
Pa01:74,811,462–74,812,811
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: NLTP2 | Seed ortholog: 337451.A0A3S3MVT0 | COG: S | eggNOG OG: Tryp_alpha_amyl@131567|A-1*, Tryp_alpha_amyl@2759|Iu-12!
Gene Ontology
GO:0003674 molecular_function; GO:0005516 calmodulin binding; GO:0005576 extracellular region; GO:0005768 endosome; GO:0005794 Golgi apparatus; GO:0005802 trans-Golgi network; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0006649 phospholipid transfer to membrane; GO:0006869 lipid transport; GO:0008134 transcription factor binding; GO:0008289 lipid binding; GO:0009414 response to water deprivation; GO:0009505 plant-type cell wall; GO:0009506 plasmodesma; GO:0009507 chloroplast; GO:0009534 chloroplast thylakoid; GO:0009651 response to salt stress; GO:0009737 response to abscisic acid; GO:0010143 cutin biosynthetic process; GO:0044403 biological process involved in symbiotic interaction; GO:0048046 apoplast; GO:0050830 defense response to Gram-positive bacterium; GO:0050832 defense response to fungus; GO:0090377 seed trichome initiation; GO:0090378 seed trichome elongation; GO:0090379 secondary cell wall biogenesis involved in seed trichome differentiation; GO:0090627 plant epidermal cell differentiation; GO:0099503 secretory vesicle; GO:0160062 cutin-based cuticle development
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.