Feature identity
- Identifier
- Pa01g2329.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,602 bp
- Genomic location
- Pa01:50,698,287–50,716,339
- Strand
- −
West Indian T2T · mRNA
Pa01g2329.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,602
- bp
- Pa01:50,698,287–50,716,339
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g2329
- eggNOG
- Preferred name: APRR1, LOC110799679 | Seed ortholog: 337451.A0A3S4NQ62, 56857.A0A200QEU3 | COG: S | eggNOG OG: CCT@131567|A-1*, CCT@1462614|QS-15, CCT@2759|H-4, CCT@33090|BC-8, Response_reg|16CZRA@1462614, Response_reg|16CZRA@33090, Response_reg|16CZRA@58023
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0010031 circumnutation; GO:0010468 regulation of gene expression; GO:0010629 negative regulation of gene expression
- KEGG
- KO: K12127 | Pathway: 04712 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g2329.2-protein
derives_frommRNAPa01g2329.2
mRNAPa01g2329.2
part_ofgenePa01g2329
exon
part_ofPa01g2329.2:1mRNAPa01g2329.2
exon
part_ofPa01g2329.2:2mRNAPa01g2329.2
exon
part_ofPa01g2329.2:3mRNAPa01g2329.2
exon
part_ofPa01g2329.2:4mRNAPa01g2329.2
exon
part_ofPa01g2329.2:5mRNAPa01g2329.2
exon
part_ofPa01g2329.2:6mRNAPa01g2329.2
CDS
part_ofPa01g2329.2:cdsmRNAPa01g2329.2
