Feature identity
- Identifier
- Pa01g2116.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,239 bp
- Genomic location
- Pa01:36,277,343–36,279,233
- Strand
- +
West Indian T2T · mRNA
Pa01g2116.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,239
- bp
- Pa01:36,277,343–36,279,233
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g2116
- eggNOG
- Preferred name: NAC078 | Seed ortholog: 337451.A0A443PVJ0 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|oz-16, NAM@35493|AE-6, NAM@58023|Abm-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005789 endoplasmic reticulum membrane; GO:0005886 plasma membrane; GO:0009644 response to high light intensity; GO:0009819 drought recovery; GO:0009962 regulation of flavonoid biosynthetic process; GO:0010150 leaf senescence; GO:0016020 membrane; GO:0045893 positive regulation of DNA-templated transcription; GO:2000377 regulation of reactive oxygen species metabolic process
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g2116.2-protein
derives_frommRNAPa01g2116.2
exon
part_ofPa01g2116.1:3mRNAPa01g2116.2
mRNAPa01g2116.2
part_ofgenePa01g2116
exon
part_ofPa01g2116.2:4mRNAPa01g2116.2
exon
part_ofPa01g2116.2:5mRNAPa01g2116.2
CDS
part_ofPa01g2116.2:cdsmRNAPa01g2116.2
