Feature identity
- Identifier
- Pa01g2115.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 441 bp
- Genomic location
- Pa01:36,221,662–36,254,322
- Strand
- +
West Indian T2T · mRNA
Pa01g2115.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 441
- bp
- Pa01:36,221,662–36,254,322
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g2115
- eggNOG
- Preferred name: TCP2 | Seed ortholog: 337451.A0A3S3Q9D2 | COG: S | eggNOG OG: TCP@131567|A-1*, TCP@2759|F-3, TCP@3398|AO-8, TCP@58023|f-6
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009637 response to blue light; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0048366 leaf development; GO:2000306 positive regulation of photomorphogenesis
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g2115.1-protein
derives_frommRNAPa01g2115.1
mRNAPa01g2115.1
part_ofgenePa01g2115
exon
part_ofPa01g2115.1:1mRNAPa01g2115.1
exon
part_ofPa01g2115.1:2mRNAPa01g2115.1
exon
part_ofPa01g2115.1:3mRNAPa01g2115.1
exon
part_ofPa01g2115.1:4mRNAPa01g2115.1
exon
part_ofPa01g2115.1:5mRNAPa01g2115.1
CDS
part_ofPa01g2115.1:cdsmRNAPa01g2115.1
