Feature identity
- Identifier
- Pa01g1855.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 873 bp
- Genomic location
- Pa01:27,690,942–27,710,137
- Strand
- −
West Indian T2T · mRNA
Pa01g1855.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 873
- bp
- Pa01:27,690,942–27,710,137
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g1855
- eggNOG
- Preferred name: HY2 | Seed ortholog: 337451.A0A443NMW8 | COG: COG5692 | eggNOG OG: Fe_bilin_red@131567|J-4
- Gene Ontology
- GO:0009507 chloroplast; GO:0010019 chloroplast-nucleus signaling pathway; GO:0050619 phytochromobilin:ferredoxin oxidoreductase activity
- KEGG
- EC: ec:1.3.7.4 | KO: K08101 | Pathway: 00860, 01110 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g1855.1-protein
derives_frommRNAPa01g1855.1
mRNAPa01g1855.1
part_ofgenePa01g1855
exon
part_ofPa01g1855.1:1mRNAPa01g1855.1
exon
part_ofPa01g1855.1:2mRNAPa01g1855.1
exon
part_ofPa01g1855.1:3mRNAPa01g1855.1
exon
part_ofPa01g1855.1:4mRNAPa01g1855.1
exon
part_ofPa01g1855.1:5mRNAPa01g1855.1
exon
part_ofPa01g1855.1:6mRNAPa01g1855.1
exon
part_ofPa01g1855.1:7mRNAPa01g1855.1
exon
part_ofPa01g1855.1:8mRNAPa01g1855.1
CDS
part_ofPa01g1855.1:cdsmRNAPa01g1855.1
