Feature identity
- Identifier
- Pa01g1618.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,131 bp
- Genomic location
- Pa01:23,964,464–23,969,368
- Strand
- +
West Indian T2T · mRNA
Pa01g1618.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,131
- bp
- Pa01:23,964,464–23,969,368
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g1618
- eggNOG
- Preferred name: LOC104593481 | Seed ortholog: 337451.A0A3S3Q6L5 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Apw-24, AP2@33090|Xs-18, AP2@58023|Bfl-26
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006109 regulation of carbohydrate metabolic process; GO:0006110 regulation of glycolytic process; GO:0006629 lipid metabolic process; GO:0008610 lipid biosynthetic process; GO:0009744 response to sucrose; GO:0019432 triglyceride biosynthetic process; GO:0019900 kinase binding; GO:1901959 positive regulation of cutin biosynthetic process
- KEGG
- KO: K09285 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g1618.1-protein
derives_frommRNAPa01g1618.1
mRNAPa01g1618.1
part_ofgenePa01g1618
exon
part_ofPa01g1618.1:1mRNAPa01g1618.1
exon
part_ofPa01g1618.1:2mRNAPa01g1618.1
exon
part_ofPa01g1618.1:3mRNAPa01g1618.1
exon
part_ofPa01g1618.1:4mRNAPa01g1618.1
exon
part_ofPa01g1618.1:5mRNAPa01g1618.1
exon
part_ofPa01g1618.1:6mRNAPa01g1618.1
CDS
part_ofPa01g1618.1:cdsmRNAPa01g1618.1
