Feature identity
- Identifier
- Pa01g1401.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 840 bp
- Genomic location
- Pa01:20,002,994–20,004,891
- Strand
- +
West Indian T2T · mRNA
Pa01g1401.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 840
- bp
- Pa01:20,002,994–20,004,891
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g1401
- eggNOG
- Preferred name: LOC107908226 | Seed ortholog: 337451.A0A3S3NGZ9 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|DqE-36, Myb_DNA-binding@35493|JLw-42
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006633 fatty acid biosynthetic process; GO:0006970 response to osmotic stress; GO:0010023 proanthocyanidin biosynthetic process
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g1401.1-protein
derives_frommRNAPa01g1401.1
mRNAPa01g1401.1
part_ofgenePa01g1401
exon
part_ofPa01g1401.1:1mRNAPa01g1401.1
exon
part_ofPa01g1401.1:2mRNAPa01g1401.1
exon
part_ofPa01g1401.1:3mRNAPa01g1401.1
CDS
part_ofPa01g1401.1:cdsmRNAPa01g1401.1
