Feature identity
- Identifier
- PaHa08g00220.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,887 bp
- Genomic location
- 8:491,051–502,279
- Strand
- −
Hass · mRNA
PaHa08g00220.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,887
- bp
- 8:491,051–502,279
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g00220
- eggNOG
- Preferred name: LOC104610318 | Seed ortholog: 337451.A0A443P8Y7 | COG: S | eggNOG OG: BES1_N@131567|A-1*, BES1_N@3398|U-6, BES1_N@35493|H-4, Glyco_hydro_14@131567|AV-8, Glyco_hydro_14@33090|Ce-12
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0048831 regulation of shoot system development
- KEGG
- EC: ec:3.2.1.2 | KO: K01177 | Pathway: 00500, 01100, 01110 | BRITE: 00001, 01000 | CAZy: GH14|Glycoside Hydrolase Family 14.
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g00220.1-protein
derives_frommRNAPaHa08g00220.1
mRNAPaHa08g00220.1
part_ofgenePaHa08g00220
CDS
part_ofPaHa08g00220.1-CDS-8-1787993825:491051..491079mRNAPaHa08g00220.1
CDS
part_ofPaHa08g00220.1-CDS-8-1787993825:491295..491511mRNAPaHa08g00220.1
CDS
part_ofPaHa08g00220.1-CDS-8-1787993825:491643..491855mRNAPaHa08g00220.1
CDS
part_ofPaHa08g00220.1-CDS-8-1787993825:492478..492738mRNAPaHa08g00220.1
CDS
part_ofPaHa08g00220.1-CDS-8-1787993825:493778..493942mRNAPaHa08g00220.1
CDS
part_ofPaHa08g00220.1-CDS-8-1787993825:494150..494232mRNAPaHa08g00220.1
CDS
part_ofPaHa08g00220.1-CDS-8-1787993825:494305..494344mRNAPaHa08g00220.1
CDS
part_ofPaHa08g00220.1-CDS-8-1787993825:494591..494794mRNAPaHa08g00220.1
CDS
part_ofPaHa08g00220.1-CDS-8-1787993825:495069..495149mRNAPaHa08g00220.1
CDS
part_ofPaHa08g00220.1-CDS-8-1787993825:497959..498183mRNAPaHa08g00220.1
CDS
part_ofPaHa08g00220.1-CDS-8-1787993825:501911..502279mRNAPaHa08g00220.1
exon
part_ofPaHa08g00220.1-exon-8-1787993825:491051..491079mRNAPaHa08g00220.1
exon
part_ofPaHa08g00220.1-exon-8-1787993825:491295..491511mRNAPaHa08g00220.1
exon
part_ofPaHa08g00220.1-exon-8-1787993825:491643..491855mRNAPaHa08g00220.1
exon
part_ofPaHa08g00220.1-exon-8-1787993825:492478..492738mRNAPaHa08g00220.1
exon
part_ofPaHa08g00220.1-exon-8-1787993825:493778..493942mRNAPaHa08g00220.1
exon
part_ofPaHa08g00220.1-exon-8-1787993825:494150..494232mRNAPaHa08g00220.1
exon
part_ofPaHa08g00220.1-exon-8-1787993825:494305..494344mRNAPaHa08g00220.1
exon
part_ofPaHa08g00220.1-exon-8-1787993825:494591..494794mRNAPaHa08g00220.1
exon
part_ofPaHa08g00220.1-exon-8-1787993825:495069..495149mRNAPaHa08g00220.1
exon
part_ofPaHa08g00220.1-exon-8-1787993825:497959..498183mRNAPaHa08g00220.1
exon
part_ofPaHa08g00220.1-exon-8-1787993825:501911..502279mRNAPaHa08g00220.1
