West Indian T2T · mRNA

Pa01g0038.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

939
bp
Pa01:587,361–588,701
genomic location
Record overview

Feature identity

Identifier
Pa01g0038.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
939 bp
Genomic location
Pa01:587,361–588,701
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: MYB306 | Seed ortholog: 337451.A0A3S4NKG3 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@1437183|ZMr-55, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|USz-51, Myb_DNA-binding@35493|KPp-43
Gene Ontology
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009787 regulation of abscisic acid-activated signaling pathway; GO:0009789 positive regulation of abscisic acid-activated signaling pathway; GO:0010115 regulation of abscisic acid biosynthetic process; GO:0010468 regulation of gene expression; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:1904278 positive regulation of wax biosynthetic process; GO:2000033 regulation of seed dormancy process
KEGG
KO: K09422 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.