Feature identity
- Identifier
- Pa01g0122.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,101 bp
- Genomic location
- Pa01:1,367,059–1,373,626
- Strand
- −
West Indian T2T · mRNA
Pa01g0122.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,101
- bp
- Pa01:1,367,059–1,373,626
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g0122
- eggNOG
- Preferred name: TGA1 | Seed ortholog: 337451.A0A443NIV0 | COG: S | eggNOG OG: DOG1@131567|A-1*, DOG1@2759|CF-9, bZIP_1@131567|B-2, bZIP_1@35493|AEr-24
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway; GO:0042742 defense response to bacterium; GO:0043565 sequence-specific DNA binding
- KEGG
- KO: K14431 | Pathway: 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g0122.2-protein
derives_frommRNAPa01g0122.2
exon
part_ofPa01g0122.1:1mRNAPa01g0122.2
exon
part_ofPa01g0122.1:2mRNAPa01g0122.2
exon
part_ofPa01g0122.1:3mRNAPa01g0122.2
exon
part_ofPa01g0122.1:4mRNAPa01g0122.2
exon
part_ofPa01g0122.1:5mRNAPa01g0122.2
exon
part_ofPa01g0122.1:6mRNAPa01g0122.2
exon
part_ofPa01g0122.1:7mRNAPa01g0122.2
mRNAPa01g0122.2
part_ofgenePa01g0122
exon
part_ofPa01g0122.2:9mRNAPa01g0122.2
CDS
part_ofPa01g0122.2:cdsmRNAPa01g0122.2
