West Indian T2T · mRNA

Pa04g1615.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

312
bp
Pa04:36,399,381–36,400,644
genomic location
Record overview

Feature identity

Identifier
Pa04g1615.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
312 bp
Genomic location
Pa04:36,399,381–36,400,644
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: CSN8, CYP704C1 | Seed ortholog: 337451.A0A3S3MT77, 337451.A0A443Q259 | COG: S | eggNOG OG: CSN8_PSD8_EIF3K@131567|A-1*, CSN8_PSD8_EIF3K@2759|B-2, p450@131567|CK-8, p450@2759|LS-11, p450@3193|ECi-21, p450@3398|FNB-22
Gene Ontology
GO:0000325 plant-type vacuole; GO:0000338 protein deneddylation; GO:0002213 defense response to insect; GO:0004222 metalloendopeptidase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0006631 fatty acid metabolic process; GO:0008150 biological_process; GO:0008180 COP9 signalosome; GO:0008610 lipid biosynthetic process; GO:0009416 response to light stimulus; GO:0009507 chloroplast; GO:0009555 pollen development; GO:0009611 response to wounding; GO:0009640 photomorphogenesis; GO:0009694 jasmonic acid metabolic process; GO:0009753 response to jasmonic acid; GO:0010025 wax biosynthetic process; GO:0010154 fruit development; GO:0010214 seed coat development; GO:0010345 suberin biosynthetic process; GO:0010387 COP9 signalosome assembly; GO:0018685 alkane 1-monooxygenase activity; GO:0042761 very long-chain fatty acid biosynthetic process; GO:0048480 stigma development; GO:0048653 anther development; GO:0052694 jasmonoyl-isoleucine-12-hydroxylase activity; GO:0080133 midchain alkane hydroxylase activity
KEGG
EC: ec:1.14.14.129, ec:1.14.14.48, ec:1.14.14.49, ec:1.14.14.80, ec:2.7.9.4 | KO: K12181, K13407, K15398, K15401, K15402, K15405, K20495, K20544, K20624, K20665, K20768, K20769 | Pathway: 00071, 00073, 01100, 01110 | BRITE: 00001, 00199, 01000, 04121
Biological context

Connected feature records

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