Feature identity
- Identifier
- Pa02g5106.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 315 bp
- Genomic location
- Pa02:104,296,477–104,296,791
- Strand
- +
West Indian T2T · mRNA
Pa02g5106.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 315
- bp
- Pa02:104,296,477–104,296,791
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa02g5106
- eggNOG
- Preferred name: COR2 | Seed ortholog: 337451.A0A3S3MJZ2 | COG: S | eggNOG OG: Aldo_ket_red@131567|CbX-22, Aldo_ket_red@1437183|gzq-42!, Aldo_ket_red@3398|efs-41
- Gene Ontology
- GO:0005829 cytosol; GO:0016491 oxidoreductase activity; GO:0019290 siderophore biosynthetic process; GO:0033707 3''-deamino-3''-oxonicotianamine reductase activity; GO:0034224 cellular response to zinc ion starvation; GO:0047036 codeinone reductase (NADPH) activity; GO:1990641 response to iron ion starvation
- KEGG
- EC: ec:1.1.1.247, ec:1.1.1.285 | KO: K08243, K13394, K22374 | Pathway: 00941, 00950, 00999, 01100, 01110 | Module: M00940, M00944, M00953 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa02g5106.1-protein
derives_frommRNAPa02g5106.1
mRNAPa02g5106.1
part_ofgenePa02g5106
exon
part_ofPa02g5106.1:1mRNAPa02g5106.1
CDS
part_ofPa02g5106.1:cdsmRNAPa02g5106.1
