West Indian T2T · mRNA

Pa02g1830.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,395
bp
Pa02:35,752,221–35,756,536
genomic location
Record overview

Feature identity

Identifier
Pa02g1830.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
1,395 bp
Genomic location
Pa02:35,752,221–35,756,536
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: ARF2 | Seed ortholog: 337451.A0A443P827 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|qd-19, AUX_IAA@3398|Auy-26, Auxin_resp@131567|A-1*, Auxin_resp@2759|N-4, Auxin_resp@3398|CF-11, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AHu-20, B3@33090|Id-12, B3@3398|BlK-27
Gene Ontology
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0009737 response to abscisic acid; GO:0009835 fruit ripening; GO:0009836 fruit ripening, climacteric; GO:0009911 positive regulation of flower development; GO:0010047 fruit dehiscence; GO:0010150 leaf senescence; GO:0010227 floral organ abscission; GO:0042803 protein homodimerization activity; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0046982 protein heterodimerization activity; GO:0048481 plant ovule development; GO:1903288 positive regulation of potassium ion import across plasma membrane
KEGG
KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.