Feature identity
- Identifier
- Pa02g0879.2
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 2,121 bp
- Genomic location
- Pa02:13,545,223–13,556,399
- Strand
- +
West Indian T2T · mRNA
Pa02g0879.2
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,121
- bp
- Pa02:13,545,223–13,556,399
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa02g0879
- eggNOG
- Preferred name: LOC123137013 | Seed ortholog: 337451.A0A443N205 | COG: COG1094 | eggNOG OG: KH_1@131567|B-2, KH_1@2759|AR-7, KH_1@35493|Li-13
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:1900057 positive regulation of leaf senescence; GO:2000028 regulation of photoperiodism, flowering
- KEGG
- KO: K13210 | BRITE: 00001, 03019, 03041
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa02g0879.2-protein
derives_frommRNAPa02g0879.2
exon
part_ofPa02g0879.1:1mRNAPa02g0879.2
exon
part_ofPa02g0879.1:2mRNAPa02g0879.2
exon
part_ofPa02g0879.1:3mRNAPa02g0879.2
exon
part_ofPa02g0879.1:4mRNAPa02g0879.2
exon
part_ofPa02g0879.1:5mRNAPa02g0879.2
exon
part_ofPa02g0879.1:6mRNAPa02g0879.2
mRNAPa02g0879.2
part_ofgenePa02g0879
exon
part_ofPa02g0879.2:9mRNAPa02g0879.2
CDS
part_ofPa02g0879.2:cdsmRNAPa02g0879.2
