Feature identity
- Identifier
- Pa01g2221.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 810 bp
- Genomic location
- Pa01:41,539,637–41,563,026
- Strand
- +
West Indian T2T · mRNA
Pa01g2221.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 810
- bp
- Pa01:41,539,637–41,563,026
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g2221
- eggNOG
- Preferred name: LOC102596619 | Seed ortholog: 4432.A0A1U7ZMN0 | COG: COG0545 | eggNOG OG: FKBP_C@131567|JD-12
- Gene Ontology
- GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008150 biological_process; GO:0009507 chloroplast; GO:0009535 chloroplast thylakoid membrane; GO:0009543 chloroplast thylakoid lumen; GO:0009579 thylakoid; GO:0016491 oxidoreductase activity; GO:0031977 thylakoid lumen
- KEGG
- EC: ec:5.2.1.8 | KO: K01802 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g2221.1-protein
derives_frommRNAPa01g2221.1
mRNAPa01g2221.1
part_ofgenePa01g2221
exon
part_ofPa01g2221.1:11mRNAPa01g2221.1
CDS
part_ofPa01g2221.1:cdsmRNAPa01g2221.1
exon
part_ofPa01g2221.2:1mRNAPa01g2221.1
exon
part_ofPa01g2221.2:10mRNAPa01g2221.1
exon
part_ofPa01g2221.2:3mRNAPa01g2221.1
exon
part_ofPa01g2221.2:4mRNAPa01g2221.1
exon
part_ofPa01g2221.2:5mRNAPa01g2221.1
exon
part_ofPa01g2221.2:6mRNAPa01g2221.1
exon
part_ofPa01g2221.2:7mRNAPa01g2221.1
exon
part_ofPa01g2221.2:8mRNAPa01g2221.1
exon
part_ofPa01g2221.2:9mRNAPa01g2221.1
