Feature identity
- Identifier
- Pa01g1833.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 804 bp
- Genomic location
- Pa01:27,417,957–27,420,270
- Strand
- −
West Indian T2T · mRNA
Pa01g1833.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 804
- bp
- Pa01:27,417,957–27,420,270
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g1833
- eggNOG
- Preferred name: ORG3 | Seed ortholog: 337451.A0A443NMS0 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|Apu-20, HLH@33090|AAF-17, HLH@3398|BVC-22, HLH@35493|AbE-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0009414 response to water deprivation; GO:0009723 response to ethylene; GO:0010104 regulation of ethylene-activated signaling pathway; GO:0010106 cellular response to iron ion starvation; GO:0045893 positive regulation of DNA-templated transcription; GO:0046685 response to arsenic-containing substance; GO:0046686 response to cadmium ion; GO:0060586 multicellular organismal-level iron ion homeostasis; GO:0071731 response to nitric oxide; GO:1900706 positive regulation of siderophore biosynthetic process; GO:1990641 response to iron ion starvation
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g1833.1-protein
derives_frommRNAPa01g1833.1
mRNAPa01g1833.1
part_ofgenePa01g1833
exon
part_ofPa01g1833.1:1mRNAPa01g1833.1
exon
part_ofPa01g1833.1:2mRNAPa01g1833.1
exon
part_ofPa01g1833.1:3mRNAPa01g1833.1
CDS
part_ofPa01g1833.1:cdsmRNAPa01g1833.1
