Feature identity
- Identifier
- Pa01g1830.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 1,317 bp
- Genomic location
- Pa01:27,382,586–27,391,778
- Strand
- −
West Indian T2T · mRNA
Pa01g1830.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,317
- bp
- Pa01:27,382,586–27,391,778
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g1830
- eggNOG
- Preferred name: LOC103719222 | Seed ortholog: 337451.A0A443NMQ5 | COG: S | eggNOG OG: PCI@131567|LE-15, eIF3_N@2759|A-1
- Gene Ontology
- GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006352 DNA-templated transcription initiation; GO:0006412 translation; GO:0008180 COP9 signalosome; GO:0009640 photomorphogenesis; GO:0009908 flower development; GO:0030371 translation repressor activity; GO:0031597 cytosolic proteasome complex
- KEGG
- EC: ec:2.6.1.62, ec:6.3.3.3 | KO: K03250 | Pathway: 03010 | Module: M00123 | BRITE: 00001, 03012, 03051, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g1830.1-protein
derives_frommRNAPa01g1830.1
mRNAPa01g1830.1
part_ofgenePa01g1830
exon
part_ofPa01g1830.1:1mRNAPa01g1830.1
exon
part_ofPa01g1830.1:2mRNAPa01g1830.1
exon
part_ofPa01g1830.1:3mRNAPa01g1830.1
exon
part_ofPa01g1830.1:4mRNAPa01g1830.1
exon
part_ofPa01g1830.1:5mRNAPa01g1830.1
exon
part_ofPa01g1830.1:6mRNAPa01g1830.1
exon
part_ofPa01g1830.1:7mRNAPa01g1830.1
exon
part_ofPa01g1830.1:8mRNAPa01g1830.1
CDS
part_ofPa01g1830.1:cdsmRNAPa01g1830.1
