West Indian T2T · mRNA

Pa01g1531.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

318
bp
Pa01:22,255,418–22,260,448
genomic location
Record overview

Feature identity

Identifier
Pa01g1531.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
318 bp
Genomic location
Pa01:22,255,418–22,260,448
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: LOC108990522 | Seed ortholog: 337451.A0A3S3MPJ9 | eggNOG OG: TFIIS_C@131567|d-5
Gene Ontology
GO:0001650 fibrillar center; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003899 DNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005736 RNA polymerase I complex; GO:0006139 nucleobase-containing compound metabolic process; GO:0006354 DNA-templated transcription elongation; GO:0006355 regulation of DNA-templated transcription; GO:0006360 transcription by RNA polymerase I; GO:0006361 transcription initiation at RNA polymerase I promoter; GO:0006362 transcription elongation by RNA polymerase I; GO:0006363 termination of RNA polymerase I transcription; GO:0008150 biological_process; GO:0008270 zinc ion binding; GO:0031981 nuclear lumen; GO:0042790 nucleolar large rRNA transcription by RNA polymerase I
KEGG
KO: K03000 | Pathway: 03020 | BRITE: 00001, 01611, 03021
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.