Feature identity
- Identifier
- Pa01g1504.1
- Feature type
- mRNA
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 783 bp
- Genomic location
- Pa01:21,819,187–21,820,707
- Strand
- +
West Indian T2T · mRNA
Pa01g1504.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 783
- bp
- Pa01:21,819,187–21,820,707
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: Pa01g1504
- eggNOG
- Preferred name: LOC104605071 | Seed ortholog: 337451.A0A3S4NNM7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@1437183|YLB-54, Myb_DNA-binding@3193|LZe-44, Myb_DNA-binding@33090|Eca-37
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009094 L-phenylalanine biosynthetic process; GO:0009642 response to light intensity; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:1901002 positive regulation of response to salt stress; GO:1901141 regulation of lignin biosynthetic process; GO:2000652 regulation of secondary cell wall biogenesis; GO:2000762 regulation of phenylpropanoid metabolic process
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePa01g1504.1-protein
derives_frommRNAPa01g1504.1
mRNAPa01g1504.1
part_ofgenePa01g1504
exon
part_ofPa01g1504.1:1mRNAPa01g1504.1
exon
part_ofPa01g1504.1:2mRNAPa01g1504.1
exon
part_ofPa01g1504.1:3mRNAPa01g1504.1
CDS
part_ofPa01g1504.1:cdsmRNAPa01g1504.1
