West Indian T2T · mRNA

Pa01g1099.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

930
bp
Pa01:15,216,917–15,223,020
genomic location
Record overview

Feature identity

Identifier
Pa01g1099.1
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
930 bp
Genomic location
Pa01:15,216,917–15,223,020
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: ptges2 | Seed ortholog: 337451.A0A443NL74 | COG: COG0625 | eggNOG OG: GST_N_3@131567|Y-5
Gene Ontology
GO:0000139 Golgi membrane; GO:0001516 prostaglandin biosynthetic process; GO:0003677 DNA binding; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0006629 lipid metabolic process; GO:0016829 lyase activity; GO:0019371 cyclooxygenase pathway; GO:0020037 heme binding; GO:0035578 azurophil granule lumen; GO:0036134 12-hydroxyheptadecatrienoic acid synthase activity; GO:0042802 identical protein binding; GO:0043295 glutathione binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0046457 prostanoid biosynthetic process; GO:0046903 secretion; GO:0050220 prostaglandin-E synthase activity
KEGG
EC: ec:5.3.99.3 | KO: K05309 | Pathway: 00590, 01100 | BRITE: 00001, 01000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.