Feature identity
- Identifier
- PaHa01g25870.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,128 bp
- Genomic location
- 1:69,767,060–69,778,936
- Strand
- +
Hass · mRNA
PaHa01g25870.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,128
- bp
- 1:69,767,060–69,778,936
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g25870
- eggNOG
- Preferred name: UBA1C | Seed ortholog: 337451.A0A3S3NIE0 | COG: S | eggNOG OG: zf-LYAR@2759|A-1, zf-met@131567|B-2
- Gene Ontology
- GO:0003674 molecular_function; GO:0003677 DNA binding; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008150 biological_process; GO:0008270 zinc ion binding; GO:0042802 identical protein binding; GO:0140297 DNA-binding transcription factor binding; GO:0140416 transcription regulator inhibitor activity
- KEGG
- KO: K15263 | Pathway: 03040 | BRITE: 00001, 03000, 03009
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g25870.1-protein
derives_frommRNAPaHa01g25870.1
mRNAPaHa01g25870.1
part_ofgenePaHa01g25870
CDS
part_ofPaHa01g25870.1-CDS-1-1787993825:69767060..69767146mRNAPaHa01g25870.1
CDS
part_ofPaHa01g25870.1-CDS-1-1787993825:69767323..69767397mRNAPaHa01g25870.1
CDS
part_ofPaHa01g25870.1-CDS-1-1787993825:69770614..69770744mRNAPaHa01g25870.1
CDS
part_ofPaHa01g25870.1-CDS-1-1787993825:69777255..69777780mRNAPaHa01g25870.1
CDS
part_ofPaHa01g25870.1-CDS-1-1787993825:69777861..69777974mRNAPaHa01g25870.1
CDS
part_ofPaHa01g25870.1-CDS-1-1787993825:69778070..69778127mRNAPaHa01g25870.1
CDS
part_ofPaHa01g25870.1-CDS-1-1787993825:69778610..69778731mRNAPaHa01g25870.1
CDS
part_ofPaHa01g25870.1-CDS-1-1787993825:69778922..69778936mRNAPaHa01g25870.1
exon
part_ofPaHa01g25870.1-exon-1-1787993825:69767060..69767146mRNAPaHa01g25870.1
exon
part_ofPaHa01g25870.1-exon-1-1787993825:69767323..69767397mRNAPaHa01g25870.1
exon
part_ofPaHa01g25870.1-exon-1-1787993825:69770614..69770744mRNAPaHa01g25870.1
exon
part_ofPaHa01g25870.1-exon-1-1787993825:69777255..69777780mRNAPaHa01g25870.1
exon
part_ofPaHa01g25870.1-exon-1-1787993825:69777861..69777974mRNAPaHa01g25870.1
exon
part_ofPaHa01g25870.1-exon-1-1787993825:69778070..69778127mRNAPaHa01g25870.1
exon
part_ofPaHa01g25870.1-exon-1-1787993825:69778610..69778731mRNAPaHa01g25870.1
exon
part_ofPaHa01g25870.1-exon-1-1787993825:69778922..69778936mRNAPaHa01g25870.1
