Feature identity
- Identifier
- PaHa01g02560.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 864 bp
- Genomic location
- 1:3,147,290–3,150,141
- Strand
- +
Hass · mRNA
PaHa01g02560.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 864
- bp
- 1:3,147,290–3,150,141
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g02560
- eggNOG
- Preferred name: MYBR14 | Seed ortholog: 337451.A0A443NJA4 | COG: S | eggNOG OG: Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@1437183|CtC-35, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@3193|BFB-31, Myb_DNA-binding@33090|Adt-29, Myb_DNA-binding@58023|CQy-34
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0007165 signal transduction; GO:0007623 circadian rhythm; GO:0009658 chloroplast organization; GO:0009910 negative regulation of flower development; GO:0010380 regulation of chlorophyll biosynthetic process; GO:0010638 positive regulation of organelle organization; GO:0045893 positive regulation of DNA-templated transcription; GO:1900056 negative regulation of leaf senescence
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g02560.1-protein
derives_frommRNAPaHa01g02560.1
mRNAPaHa01g02560.1
part_ofgenePaHa01g02560
CDS
part_ofPaHa01g02560.1-CDS-1-1787993825:3147290..3147416mRNAPaHa01g02560.1
CDS
part_ofPaHa01g02560.1-CDS-1-1787993825:3147527..3147603mRNAPaHa01g02560.1
CDS
part_ofPaHa01g02560.1-CDS-1-1787993825:3147744..3147780mRNAPaHa01g02560.1
CDS
part_ofPaHa01g02560.1-CDS-1-1787993825:3148351..3148480mRNAPaHa01g02560.1
CDS
part_ofPaHa01g02560.1-CDS-1-1787993825:3148574..3148790mRNAPaHa01g02560.1
CDS
part_ofPaHa01g02560.1-CDS-1-1787993825:3149866..3150141mRNAPaHa01g02560.1
exon
part_ofPaHa01g02560.1-exon-1-1787993825:3147290..3147416mRNAPaHa01g02560.1
exon
part_ofPaHa01g02560.1-exon-1-1787993825:3147527..3147603mRNAPaHa01g02560.1
exon
part_ofPaHa01g02560.1-exon-1-1787993825:3147744..3147780mRNAPaHa01g02560.1
exon
part_ofPaHa01g02560.1-exon-1-1787993825:3148351..3148480mRNAPaHa01g02560.1
exon
part_ofPaHa01g02560.1-exon-1-1787993825:3148574..3148790mRNAPaHa01g02560.1
exon
part_ofPaHa01g02560.1-exon-1-1787993825:3149866..3150141mRNAPaHa01g02560.1
