Feature identity
- Identifier
- PaHa01g26050.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 774 bp
- Genomic location
- 1:70,215,663–70,230,755
- Strand
- −
Hass · mRNA
PaHa01g26050.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 774
- bp
- 1:70,215,663–70,230,755
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g26050
- eggNOG
- Preferred name: LOC104602644 | Seed ortholog: 337451.A0A443NPB0 | eggNOG OG: CBFD_NFYB_HMF@131567|BR-10
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- EC: ec:2.7.7.7 | KO: K03506, K11656 | Pathway: 03030, 03082, 03410, 03420 | BRITE: 00001, 01000, 03032, 03036, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g26050.1-protein
derives_frommRNAPaHa01g26050.1
mRNAPaHa01g26050.1
part_ofgenePaHa01g26050
CDS
part_ofPaHa01g26050.1-CDS-1-1787993825:70215663..70215776mRNAPaHa01g26050.1
CDS
part_ofPaHa01g26050.1-CDS-1-1787993825:70216642..70216806mRNAPaHa01g26050.1
CDS
part_ofPaHa01g26050.1-CDS-1-1787993825:70219852..70219892mRNAPaHa01g26050.1
CDS
part_ofPaHa01g26050.1-CDS-1-1787993825:70220001..70220042mRNAPaHa01g26050.1
CDS
part_ofPaHa01g26050.1-CDS-1-1787993825:70229403..70229487mRNAPaHa01g26050.1
CDS
part_ofPaHa01g26050.1-CDS-1-1787993825:70230429..70230755mRNAPaHa01g26050.1
exon
part_ofPaHa01g26050.1-exon-1-1787993825:70215663..70215776mRNAPaHa01g26050.1
exon
part_ofPaHa01g26050.1-exon-1-1787993825:70216642..70216806mRNAPaHa01g26050.1
exon
part_ofPaHa01g26050.1-exon-1-1787993825:70219852..70219892mRNAPaHa01g26050.1
exon
part_ofPaHa01g26050.1-exon-1-1787993825:70220001..70220042mRNAPaHa01g26050.1
exon
part_ofPaHa01g26050.1-exon-1-1787993825:70229403..70229487mRNAPaHa01g26050.1
exon
part_ofPaHa01g26050.1-exon-1-1787993825:70230429..70230755mRNAPaHa01g26050.1
