Feature identity
- Identifier
- PaHa08g21520.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 885 bp
- Genomic location
- 8:57,860,634–57,867,290
- Strand
- −
Hass · mRNA
PaHa08g21520.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 885
- bp
- 8:57,860,634–57,867,290
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa08g21520
- eggNOG
- Preferred name: ERF113 | Seed ortholog: 337451.A0A443P869 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@1437183|CRa-28, AP2@3193|KH-15, AP2@33090|Hp-14, AP2@58023|bg-19
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009723 response to ethylene; GO:0009737 response to abscisic acid; GO:0009751 response to salicylic acid; GO:0009753 response to jasmonic acid; GO:0019760 glucosinolate metabolic process; GO:0045893 positive regulation of DNA-templated transcription; GO:0071497 cellular response to freezing
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa08g21520.1-protein
derives_frommRNAPaHa08g21520.1
mRNAPaHa08g21520.1
part_ofgenePaHa08g21520
CDS
part_ofPaHa08g21520.1-CDS-8-1787993825:57860634..57861199mRNAPaHa08g21520.1
CDS
part_ofPaHa08g21520.1-CDS-8-1787993825:57862487..57862733mRNAPaHa08g21520.1
CDS
part_ofPaHa08g21520.1-CDS-8-1787993825:57867219..57867290mRNAPaHa08g21520.1
exon
part_ofPaHa08g21520.1-exon-8-1787993825:57860634..57861199mRNAPaHa08g21520.1
exon
part_ofPaHa08g21520.1-exon-8-1787993825:57862487..57862733mRNAPaHa08g21520.1
exon
part_ofPaHa08g21520.1-exon-8-1787993825:57867219..57867290mRNAPaHa08g21520.1
