Feature identity
- Identifier
- PaHa09g02220.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 633 bp
- Genomic location
- 9:4,198,574–4,200,279
- Strand
- +
Hass · mRNA
PaHa09g02220.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 633
- bp
- 9:4,198,574–4,200,279
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g02220
- eggNOG
- Preferred name: ERF071 | Seed ortholog: 337451.A0A3S3NUE5 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@3193|KI-15, AP2@33090|Hp-14, AP2@3398|jd-20, AP2@58023|Vz-18
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0034059 response to anoxia; GO:0045893 positive regulation of DNA-templated transcription; GO:0071456 cellular response to hypoxia; GO:1990837 sequence-specific double-stranded DNA binding; GO:2000280 regulation of root development
- KEGG
- KO: K09286 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g02220.1-protein
derives_frommRNAPaHa09g02220.1
mRNAPaHa09g02220.1
part_ofgenePaHa09g02220
CDS
part_ofPaHa09g02220.1-CDS-9-1787993825:4198574..4198682mRNAPaHa09g02220.1
CDS
part_ofPaHa09g02220.1-CDS-9-1787993825:4199564..4199781mRNAPaHa09g02220.1
CDS
part_ofPaHa09g02220.1-CDS-9-1787993825:4199974..4200279mRNAPaHa09g02220.1
exon
part_ofPaHa09g02220.1-exon-9-1787993825:4198574..4198682mRNAPaHa09g02220.1
exon
part_ofPaHa09g02220.1-exon-9-1787993825:4199564..4199781mRNAPaHa09g02220.1
exon
part_ofPaHa09g02220.1-exon-9-1787993825:4199974..4200279mRNAPaHa09g02220.1
