Feature identity
- Identifier
- PaHa01g27260.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 804 bp
- Genomic location
- 1:72,951,713–72,953,186
- Strand
- −
Hass · mRNA
PaHa01g27260.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 804
- bp
- 1:72,951,713–72,953,186
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g27260
- eggNOG
- Preferred name: LOC116202350 | Seed ortholog: 337451.A0A3S3NIJ5 | COG: S | eggNOG OG: GATA@131567|A-1*, GATA@2759|B-2!, GATA@3193|Ad-8, GATA@58023|Gn-13
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- EC: ec:2.7.11.22, ec:2.8.1.7, ec:5.6.2.7, ec:6.3.2.2 | KO: K04487, K05626, K05628, K06669, K08817, K09182, K09183, K09184, K11204, K11339, K11648, K11660, K11770, K14809, K14972, K17604, K17894, K17895, K17896, K17897, K18658, K21630, K22040, K22184, K23194, K23407 | Pathway: 00270, 00480, 00730, 01100, 01240, 03082, 03250, 04022, 04122, 04218, 04530, 04658, 04659, 04919, 04928, 05321 | Module: M00118 | BRITE: 00001, 00535, 01000, 01001, 01009, 02048, 03000, 03009, 03016, 03019, 03021, 03029, 03036, 03400
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g27260.1-protein
derives_frommRNAPaHa01g27260.1
mRNAPaHa01g27260.1
part_ofgenePaHa01g27260
CDS
part_ofPaHa01g27260.1-CDS-1-1787993825:72951713..72952399mRNAPaHa01g27260.1
CDS
part_ofPaHa01g27260.1-CDS-1-1787993825:72953070..72953186mRNAPaHa01g27260.1
exon
part_ofPaHa01g27260.1-exon-1-1787993825:72951713..72952399mRNAPaHa01g27260.1
exon
part_ofPaHa01g27260.1-exon-1-1787993825:72953070..72953186mRNAPaHa01g27260.1
