Feature identity
- Identifier
- PaHa09g18160.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,548 bp
- Genomic location
- 9:46,561,216–46,563,808
- Strand
- −
Hass · mRNA
PaHa09g18160.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,548
- bp
- 9:46,561,216–46,563,808
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g18160
- eggNOG
- Preferred name: MGP | Seed ortholog: 337451.A0A443PY40 | COG: S | eggNOG OG: zf-C2H2@131567|qO-18, zf-C2H2@2759|AFG-19, zf-C2H2@3193|NKa-33
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009937 regulation of gibberellic acid mediated signaling pathway; GO:0010336 gibberellic acid homeostasis
- KEGG
- KO: K25869 | Pathway: 04391, 05168 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g18160.1-protein
derives_frommRNAPaHa09g18160.1
mRNAPaHa09g18160.1
part_ofgenePaHa09g18160
CDS
part_ofPaHa09g18160.1-CDS-9-1787993825:46561216..46561946mRNAPaHa09g18160.1
CDS
part_ofPaHa09g18160.1-CDS-9-1787993825:46562404..46562678mRNAPaHa09g18160.1
CDS
part_ofPaHa09g18160.1-CDS-9-1787993825:46563001..46563397mRNAPaHa09g18160.1
CDS
part_ofPaHa09g18160.1-CDS-9-1787993825:46563664..46563808mRNAPaHa09g18160.1
exon
part_ofPaHa09g18160.1-exon-9-1787993825:46561216..46561946mRNAPaHa09g18160.1
exon
part_ofPaHa09g18160.1-exon-9-1787993825:46562404..46562678mRNAPaHa09g18160.1
exon
part_ofPaHa09g18160.1-exon-9-1787993825:46563001..46563397mRNAPaHa09g18160.1
exon
part_ofPaHa09g18160.1-exon-9-1787993825:46563664..46563808mRNAPaHa09g18160.1
