Feature identity
- Identifier
- PaHa09g19730.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,281 bp
- Genomic location
- 9:48,857,082–48,863,153
- Strand
- −
Hass · mRNA
PaHa09g19730.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,281
- bp
- 9:48,857,082–48,863,153
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa09g19730
- eggNOG
- Preferred name: LOC100808239 | Seed ortholog: 337451.A0A3S3NWH5 | COG: S | eggNOG OG: AAA@131567|Afu-19, AAA@2759|NSR-33, AAA_lid_3@131567|DL-10, AAA_lid_3@2759|Xn-16, AAA_lid_3@3193|NaB-40, AAA_lid_3@33090|Eyw-31
- Gene Ontology
- GO:0000502 proteasome complex; GO:0004175 endopeptidase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0008540 proteasome regulatory particle, base subcomplex; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding; GO:0031625 ubiquitin protein ligase binding; GO:0036402 proteasome-activating activity; GO:0140296 general transcription initiation factor binding
- KEGG
- EC: ec:1.3.5.1 | KO: K03061 | Pathway: 03050 | Module: M00009, M00011, M00148 | BRITE: 00001, 03051
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa09g19730.1-protein
derives_frommRNAPaHa09g19730.1
mRNAPaHa09g19730.1
part_ofgenePaHa09g19730
CDS
part_ofPaHa09g19730.1-CDS-9-1787993825:48857082..48857239mRNAPaHa09g19730.1
CDS
part_ofPaHa09g19730.1-CDS-9-1787993825:48857490..48857665mRNAPaHa09g19730.1
CDS
part_ofPaHa09g19730.1-CDS-9-1787993825:48857925..48858106mRNAPaHa09g19730.1
CDS
part_ofPaHa09g19730.1-CDS-9-1787993825:48858255..48858473mRNAPaHa09g19730.1
CDS
part_ofPaHa09g19730.1-CDS-9-1787993825:48860505..48860649mRNAPaHa09g19730.1
CDS
part_ofPaHa09g19730.1-CDS-9-1787993825:48861103..48861164mRNAPaHa09g19730.1
CDS
part_ofPaHa09g19730.1-CDS-9-1787993825:48861257..48861334mRNAPaHa09g19730.1
CDS
part_ofPaHa09g19730.1-CDS-9-1787993825:48861424..48861515mRNAPaHa09g19730.1
CDS
part_ofPaHa09g19730.1-CDS-9-1787993825:48862472..48862553mRNAPaHa09g19730.1
CDS
part_ofPaHa09g19730.1-CDS-9-1787993825:48863067..48863153mRNAPaHa09g19730.1
exon
part_ofPaHa09g19730.1-exon-9-1787993825:48857082..48857239mRNAPaHa09g19730.1
exon
part_ofPaHa09g19730.1-exon-9-1787993825:48857490..48857665mRNAPaHa09g19730.1
exon
part_ofPaHa09g19730.1-exon-9-1787993825:48857925..48858106mRNAPaHa09g19730.1
exon
part_ofPaHa09g19730.1-exon-9-1787993825:48858255..48858473mRNAPaHa09g19730.1
exon
part_ofPaHa09g19730.1-exon-9-1787993825:48860505..48860649mRNAPaHa09g19730.1
exon
part_ofPaHa09g19730.1-exon-9-1787993825:48861103..48861164mRNAPaHa09g19730.1
exon
part_ofPaHa09g19730.1-exon-9-1787993825:48861257..48861334mRNAPaHa09g19730.1
exon
part_ofPaHa09g19730.1-exon-9-1787993825:48861424..48861515mRNAPaHa09g19730.1
exon
part_ofPaHa09g19730.1-exon-9-1787993825:48862472..48862553mRNAPaHa09g19730.1
exon
part_ofPaHa09g19730.1-exon-9-1787993825:48863067..48863153mRNAPaHa09g19730.1
