Feature identity
- Identifier
- PaHa10g05590.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,197 bp
- Genomic location
- 10:22,565,781–22,585,687
- Strand
- −
Hass · mRNA
PaHa10g05590.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,197
- bp
- 10:22,565,781–22,585,687
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g05590
- eggNOG
- Preferred name: POSF21 | Seed ortholog: 337451.A0A3S3P9Y8 | COG: S | eggNOG OG: bZIP_1@131567|BO-8!, bZIP_1@3193|Afi-26, bZIP_1@33090|QU-15, bZIP_1@3398|BHr-28, bZIP_1@35493|ATZ-25
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K09043 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g05590.1-protein
derives_frommRNAPaHa10g05590.1
mRNAPaHa10g05590.1
part_ofgenePaHa10g05590
CDS
part_ofPaHa10g05590.1-CDS-10-1787993825:22565781..22566076mRNAPaHa10g05590.1
CDS
part_ofPaHa10g05590.1-CDS-10-1787993825:22582847..22582931mRNAPaHa10g05590.1
CDS
part_ofPaHa10g05590.1-CDS-10-1787993825:22583772..22583904mRNAPaHa10g05590.1
CDS
part_ofPaHa10g05590.1-CDS-10-1787993825:22585005..22585687mRNAPaHa10g05590.1
exon
part_ofPaHa10g05590.1-exon-10-1787993825:22565781..22566076mRNAPaHa10g05590.1
exon
part_ofPaHa10g05590.1-exon-10-1787993825:22582847..22582931mRNAPaHa10g05590.1
exon
part_ofPaHa10g05590.1-exon-10-1787993825:22583772..22583904mRNAPaHa10g05590.1
exon
part_ofPaHa10g05590.1-exon-10-1787993825:22585005..22585687mRNAPaHa10g05590.1
