Feature identity
- Identifier
- PaHa10g05730.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,424 bp
- Genomic location
- 10:23,222,684–23,231,101
- Strand
- −
Hass · mRNA
PaHa10g05730.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,424
- bp
- 10:23,222,684–23,231,101
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g05730
- eggNOG
- Preferred name: LOC104610873 | Seed ortholog: 337451.A0A3S4PQ59 | COG: S | eggNOG OG: Homeodomain@131567|Fe-12, Homeodomain@1437183|Keq-34, Homeodomain@3193|EBq-28, Homeodomain@3398|Hxc-32, Homeodomain@35493|DQH-27, START@131567|e-5, START@2759|CM-9!, START@3398|AyK-24, START@35493|eI-17
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010090 trichome morphogenesis; GO:0010214 seed coat development; GO:0048354 mucilage biosynthetic process involved in seed coat development; GO:0048497 maintenance of floral organ identity; GO:0052541 plant-type cell wall cellulose metabolic process; GO:2000144 positive regulation of DNA-templated transcription initiation
- KEGG
- KO: K09338 | Pathway: 04814 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g05730.1-protein
derives_frommRNAPaHa10g05730.1
mRNAPaHa10g05730.1
part_ofgenePaHa10g05730
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23222684..23222832mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23224287..23224336mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23224389..23224675mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23224818..23224913mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23226976..23227247mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23227688..23227862mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23227987..23228187mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23228501..23228602mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23228694..23229161mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23229274..23229462mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23229678..23229795mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23229895..23230115mRNAPaHa10g05730.1
CDS
part_ofPaHa10g05730.1-CDS-10-1787993825:23231006..23231101mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23222684..23222832mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23224287..23224336mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23224389..23224675mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23224818..23224913mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23226976..23227247mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23227688..23227862mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23227987..23228187mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23228501..23228602mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23228694..23229161mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23229274..23229462mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23229678..23229795mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23229895..23230115mRNAPaHa10g05730.1
exon
part_ofPaHa10g05730.1-exon-10-1787993825:23231006..23231101mRNAPaHa10g05730.1
