Feature identity
- Identifier
- PaHa10g06710.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,230 bp
- Genomic location
- 10:26,803,144–26,806,924
- Strand
- −
Hass · mRNA
PaHa10g06710.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,230
- bp
- 10:26,803,144–26,806,924
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g06710
- eggNOG
- Preferred name: COL12 | Seed ortholog: 337451.A0A443PRR0 | COG: S | eggNOG OG: CCT@131567|A-1*, CCT@2759|t-6, CCT@3193|Ga-11, CCT@3398|Oh-14
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008150 biological_process; GO:0010629 negative regulation of gene expression; GO:0048579 negative regulation of long-day photoperiodism, flowering; GO:2000032 regulation of secondary shoot formation
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g06710.1-protein
derives_frommRNAPaHa10g06710.1
mRNAPaHa10g06710.1
part_ofgenePaHa10g06710
CDS
part_ofPaHa10g06710.1-CDS-10-1787993825:26803144..26803270mRNAPaHa10g06710.1
CDS
part_ofPaHa10g06710.1-CDS-10-1787993825:26803980..26804308mRNAPaHa10g06710.1
CDS
part_ofPaHa10g06710.1-CDS-10-1787993825:26805041..26805256mRNAPaHa10g06710.1
CDS
part_ofPaHa10g06710.1-CDS-10-1787993825:26806367..26806924mRNAPaHa10g06710.1
exon
part_ofPaHa10g06710.1-exon-10-1787993825:26803144..26803270mRNAPaHa10g06710.1
exon
part_ofPaHa10g06710.1-exon-10-1787993825:26803980..26804308mRNAPaHa10g06710.1
exon
part_ofPaHa10g06710.1-exon-10-1787993825:26805041..26805256mRNAPaHa10g06710.1
exon
part_ofPaHa10g06710.1-exon-10-1787993825:26806367..26806924mRNAPaHa10g06710.1
