Feature identity
- Identifier
- PaHa10g08320.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,013 bp
- Genomic location
- 10:31,037,398–31,054,571
- Strand
- −
Hass · mRNA
PaHa10g08320.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,013
- bp
- 10:31,037,398–31,054,571
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g08320
- eggNOG
- Preferred name: TIF3B1 | Seed ortholog: 337451.A0A3S3R0Q9 | COG: COG0823 | eggNOG OG: RRM_1@131567|Gk-13, RRM_1@2759|hZ-20, eIF2A@131567|C-2
- Gene Ontology
- GO:0001732 formation of cytoplasmic translation initiation complex; GO:0002183 cytoplasmic translational initiation; GO:0003313 heart rudiment development; GO:0003743 translation initiation factor activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006396 RNA processing; GO:0006413 translational initiation; GO:0006446 regulation of translational initiation; GO:0008150 biological_process; GO:0009536 plastid; GO:0009847 spore germination; GO:0010608 post-transcriptional regulation of gene expression; GO:0014032 neural crest cell development; GO:0030707 follicle cell of egg chamber development; GO:0071466 cellular response to xenobiotic stimulus; GO:0075522 IRES-dependent viral translational initiation; GO:0075525 viral translational termination-reinitiation
- KEGG
- KO: K03253 | BRITE: 00001, 03012, 03019
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g08320.1-protein
derives_frommRNAPaHa10g08320.1
mRNAPaHa10g08320.1
part_ofgenePaHa10g08320
CDS
part_ofPaHa10g08320.1-CDS-10-1787993825:31037398..31037610mRNAPaHa10g08320.1
CDS
part_ofPaHa10g08320.1-CDS-10-1787993825:31039149..31039257mRNAPaHa10g08320.1
CDS
part_ofPaHa10g08320.1-CDS-10-1787993825:31039359..31039891mRNAPaHa10g08320.1
CDS
part_ofPaHa10g08320.1-CDS-10-1787993825:31040110..31040308mRNAPaHa10g08320.1
CDS
part_ofPaHa10g08320.1-CDS-10-1787993825:31040710..31040834mRNAPaHa10g08320.1
CDS
part_ofPaHa10g08320.1-CDS-10-1787993825:31040915..31040998mRNAPaHa10g08320.1
CDS
part_ofPaHa10g08320.1-CDS-10-1787993825:31041085..31041213mRNAPaHa10g08320.1
CDS
part_ofPaHa10g08320.1-CDS-10-1787993825:31047068..31047196mRNAPaHa10g08320.1
CDS
part_ofPaHa10g08320.1-CDS-10-1787993825:31050866..31051012mRNAPaHa10g08320.1
CDS
part_ofPaHa10g08320.1-CDS-10-1787993825:31054135..31054375mRNAPaHa10g08320.1
CDS
part_ofPaHa10g08320.1-CDS-10-1787993825:31054468..31054571mRNAPaHa10g08320.1
exon
part_ofPaHa10g08320.1-exon-10-1787993825:31037398..31037610mRNAPaHa10g08320.1
exon
part_ofPaHa10g08320.1-exon-10-1787993825:31039149..31039257mRNAPaHa10g08320.1
exon
part_ofPaHa10g08320.1-exon-10-1787993825:31039359..31039891mRNAPaHa10g08320.1
exon
part_ofPaHa10g08320.1-exon-10-1787993825:31040110..31040308mRNAPaHa10g08320.1
exon
part_ofPaHa10g08320.1-exon-10-1787993825:31040710..31040834mRNAPaHa10g08320.1
exon
part_ofPaHa10g08320.1-exon-10-1787993825:31040915..31040998mRNAPaHa10g08320.1
exon
part_ofPaHa10g08320.1-exon-10-1787993825:31041085..31041213mRNAPaHa10g08320.1
exon
part_ofPaHa10g08320.1-exon-10-1787993825:31047068..31047196mRNAPaHa10g08320.1
exon
part_ofPaHa10g08320.1-exon-10-1787993825:31050866..31051012mRNAPaHa10g08320.1
exon
part_ofPaHa10g08320.1-exon-10-1787993825:31054135..31054375mRNAPaHa10g08320.1
exon
part_ofPaHa10g08320.1-exon-10-1787993825:31054468..31054571mRNAPaHa10g08320.1
