Feature identity
- Identifier
- PaHa10g08410.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,083 bp
- Genomic location
- 10:31,208,510–31,209,839
- Strand
- −
Hass · mRNA
PaHa10g08410.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,083
- bp
- 10:31,208,510–31,209,839
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g08410
- eggNOG
- Preferred name: MYB39 | Seed ortholog: 337451.A0A443PS36 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|HJd-40, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|Vkj-52, Myb_DNA-binding@35493|GNw-39, Myb_DNA-binding@58023|IIy-41
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006970 response to osmotic stress; GO:0009611 response to wounding; GO:0009737 response to abscisic acid
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g08410.1-protein
derives_frommRNAPaHa10g08410.1
mRNAPaHa10g08410.1
part_ofgenePaHa10g08410
CDS
part_ofPaHa10g08410.1-CDS-10-1787993825:31208510..31209329mRNAPaHa10g08410.1
CDS
part_ofPaHa10g08410.1-CDS-10-1787993825:31209445..31209574mRNAPaHa10g08410.1
CDS
part_ofPaHa10g08410.1-CDS-10-1787993825:31209707..31209839mRNAPaHa10g08410.1
exon
part_ofPaHa10g08410.1-exon-10-1787993825:31208510..31209329mRNAPaHa10g08410.1
exon
part_ofPaHa10g08410.1-exon-10-1787993825:31209445..31209574mRNAPaHa10g08410.1
exon
part_ofPaHa10g08410.1-exon-10-1787993825:31209707..31209839mRNAPaHa10g08410.1
