Anise · gene

Chr12.g83093

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

632
bp
Chr12:48,510,860–48,511,491
genomic location
Record overview

Feature identity

Identifier
Chr12.g83093
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
632 bp
Genomic location
Chr12:48,510,860–48,511,491
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010272642.1,S,[transcription factor]
Gene Ontology
transcription factor | GO:0006355//regulation of transcription, DNA-templated; GO:0007623//circadian rhythm; GO:0008150//biological_process; GO:0009314//response to radiation; GO:0009416//response to light stimulus; GO:0009628//response to abiotic stimulus; GO:0009639//response to red or far red light; GO:0009641//shade avoidance; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010558//negative regulation of macromolecule biosynthetic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010629//negative regulation of gene expression; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031327//negative regulation of cellular biosynthetic process; GO:0032502//developmental process; GO:0045892//negative regulation of transcription, DNA-templated; GO:0045934//negative regulation of nucleobase-containing compound metabolic process; GO:0048511//rhythmic process; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051253//negative regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:1902679//negative regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903507//negative regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000113//negative regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003712//transcription cofactor activity; GO:0005488//binding; GO:0005515//protein binding; GO:0042802//identical protein binding; GO:0042803//protein homodimerization activity; GO:0046983//protein dimerization activity
NR
RWR96157.1 transcription factor PAR1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9LXR7.1 RecName: Full=Transcription factor PAR2; AltName: Full=Basic helix-loop-helix protein 166; Short=AtbHLH166; Short=bHLH 166; AltName: Full=Protein HELIX-LOOP-HELIX 2; AltName: Full=Protein PHYTOCHROME RAPIDLY REGULATED 2; AltName: Full=bHLH transcription factor bHLH166 [Arabidopsis thaliana]
Biological context

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