Anise · gene

Chr12.g82986

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

8,308
bp
Chr12:47,239,877–47,248,184
genomic location
Record overview

Feature identity

Identifier
Chr12.g82986
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
8,308 bp
Genomic location
Chr12:47,239,877–47,248,184
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
3988.XP_002509465.1,K,[helix loop helix domain]
Gene Ontology
helix loop helix domain | GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006950//response to stress; GO:0006952//defense response; GO:0008150//biological_process; GO:0009605//response to external stimulus; GO:0009607//response to biotic stimulus; GO:0009620//response to fungus; GO:0009889//regulation of biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0043207//response to external biotic stimulus; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050832//defense response to fungus; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051704//multi-organism process; GO:0051707//response to other organism; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:0098542//defense response to other organism; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005667//transcription factor complex; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0044798//nuclear transcription factor complex; GO:0090575//RNA polymerase II transcription factor complex | GO:0000976//transcription regulatory region sequence-specific DNA binding; GO:0000977//RNA polymerase II regulatory region sequence-specific DNA binding; GO:0001012//RNA polymerase II regulatory region DNA binding; GO:0001067//regulatory region nucleic acid binding; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003690//double-stranded DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding; GO:1990837//sequence-specific double-stranded DNA binding
NR
RWR97419.1 transcription factor bHLH36-like protein [Cinnamomum micranthum f. kanehirae]
Biological context

Connected feature records

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